Biomath Communications Supplement

About the Journal

This journal is devoted to publication of conference materials - abstracts of plenary talks, contributed presentations and posters - of the conference BIOMATH https://www.biomath.bg/.

Current Issue

BIOMATH 2025

Conference abstracts for BIOMATH 2025 ordered alphabetically by the name of the presenting author.

The forum is organised with the financial support of the Bulgarian National Science Fund (Contract KP-06-MNF-49/16.12.2024). The Bulgarian National Science Fund is not responsible for the content of the reports presented at the scientific forum, nor for the content of advertising materials and other materials of the forum.

Published: 2024-09-24

Keynote/Invited Presentations

Stackelberg evolutionary games for managing evolving resources, pests and cancer

Joel S. Brown*
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Mathematical insights into tumour-immune dynamics: Navigating a shifting landscape

Helen Byrne*
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PDE models for the growth of phenotypically heterogeneous cell populations

Tommaso Lorenzi*
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Combining image analysis with dynamic models to improve understanding of vascular disease

Mette Olufsen*
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Numerical challenges for peroperative liver tumor ablations by electroporation

Clair Poignard*
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Detecting multiple timescales and computing high-order phase reductions

Bob W. Rink*
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Conference Contributions

Management of EBHSV-infected eastern cottontail invasion in Italy using Z-type control method

Francesca Acotto*, Fabiana Camattari, Ezio Venturino
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Modeling dengue dynamics: unraveling the impact of homologous reinfections

Maíra Aguiar*, Vizda Anam, Akhil Kumar Srivastav, Vanessa Steindorf, Nico Stollewnerk
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Bioeconomic modeling for the sustainable exploitation of three key marine species in Morocco

Ilham Ait El Harch*, Khalid Outaaoui, Youssef El Foutayeni
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Modeling radiotherapy response to tumor heterogeneity and its microenvironment

Francesco Albanese*, Giulia Chiari, Marcello Edoardo Delitala
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A metabolic-consumer-resource model with a moving tumour boundary

Mohd Almie Alias*, Nor Farah Wahidah Nor Khalid
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Predicting cleavage sites of Cathepsin-V using machine learning models

Nida Ansari*, Georgi Momekov, Ivan Dimitrov
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Comparing different interpretations of the set-based Dempster-Shafer theory for explainable and fair prediction of hereditary BRCA1/2 mutations

Ekaterina Auer*, Wolfram Luther, Lorenz Gillner, Pascal Müller
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Stabilization of a prey-predator system via targeted control in space and across populations

Teodora Baciu*
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Spatio-temporal dynamics of an ecological model with Cosner's functional response and prey taxis in networked vs. non-networked environments

Masoom Bhargava*, Balram Dubey, Ranjit Kumar Upadhyay
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Reinfection induced multistability in an epidemic model

Pierre-Alexandre Bliman*, Marcel Fang
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Dynamics of prey-predator network model with application to virus and immune response evolution

Cameron Browne*
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A model for biological transport gTASEP with OBC: some recent rigorous results

Nadezhda Zh. Bunzarova*, Alexander M. Povolotsky, Nina C. Pesheva
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Mathematical modeling of innate immune response dynamics in early-stage inflammation

Mehtap Lafcı Büyükkahraman*
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A double free boundary model for biofilm growth and microbially induced corrosion in wastewater concrete pipes

Antonella Capuozzo*, Alberto Tenore, Fabiana Russo, Luigi Frunzo
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Beyond impaired DNA repair: Exploring the radiosensitizing mechanisms of hyperthermia through mathematical modeling and Monte Carlo simulations

Adriana M. De Mendoza*, Edwin Munévar, Cesar Herreño, Jose L. Rodríguez, Diego A. Rodríguez
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Application of the information entropy and machine learning algorithms for the prediction of peptide binders to the HLA-DRB1*03:01 allele

Ivan Dimitrov*, Mariyana Atanasova, Irini Doytchinova
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New results on the combination of Sterile Insect Technique and enthomopathogenic fungi

Yves Dumont*
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Mathematical modelling on the roles of white blood cells on cancerous tumour growth

M. O. Durojaye*, A. P. Odey
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Mathematical modelling in preclinical drug development in oncology: A perspective from the industry side

Ján Eliaš*
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Sensitive detection of copy number alterations in low-quality liquid biopsy sequencing data

Lotta Eriksson*, Eszter Lakatos
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Modelling vectorial capacity and optimising vector control across reservoir and dead-end hosts

Emma L. Fairbanks*, Matthew Baylis, Janet M. Daly, Mike J. Tildesley
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Ecological resilience in microbial species: A multi-species cross-diffusion model for microbial competition and commensalism

Viktoria Freingruber*
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An upscaled model of multispecies biofilm in marine sediment

Luigi Frunzo*, Ahmed Fathi, Maria Rosaria Mattei
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Inverse modelling of honeybee hives weight dynamics

Atanas Atanasov, Slavi Georgiev*, Lubin Vulkov
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On the robustness of oscillations in a mixed mechanism phosphorylation system against perturbations in the total amount of the processive enzyme

Kim-Joao Grasse*, Carsten Conradi
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Multi-scale models of infectious disease dynamics and validating with data

Hayriye Gulbudak*
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Optimal breast cancer hormone therapy strategy under uncertainty in clients behavior: A H2-H∞ robust control approach

V. Kumar Murty, Mortaza Baky Haskuee*
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Matched asymptotic analysis of the Luria-Delbrück distribution in a reversible fluctuation assay

Anna Hlubinová*, Pavol Bokes, Abhyudai Singh
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ML models for functional SNV prioritization using allele-specific expression from single-cell RNA-seq

Vania Ballesteros Prieto, Sunisha Harish, Siera Martinez, Tushar Sharma, Luke Johnson, Hovhannes Arestakesyan, Jewel Dias, Joseph Goldfrank, Anelia Horvath*
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Mathematical modelling of the neuromuscular activity of a motor unit

Zdravka D. Ivanova*, Tihomir B. Ivanov, Rositsa T. Raikova
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Modeling malaria transmission with age structure: Insights from case studies in Senegal

Rama Seck, Diene Ngom, Benjamin Ivorra*, Angel M. Ramos
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Cramér-von Mises statistic for continuous distributions: A Monte-Carlo study for calculating its associated probability

Lorentz Jäntschi*
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Modeling activation of pregnane X receptor and mRNA expression of cytochromes P450 in 3D primary human hepatocytes

Ellen Tanaka Kahiya*, Tomáš Smutný, Jurjen Duintjer Tebbens, Petr Pávek, Veronika Bernhauerová
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Exploring the polyreactivity of monoclonal antibodies using igome graphs

Elena Keskinova*, Anastas Pashov
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A SIMPL model of phage-bacteria interactions accounting for mutation and competition

Carli Peterson, Darsh Gandhi, Austin Carlson, Aaron Lubkemann, Emma Richardson, John Serralta, Michael S. Allen, Souvik Roy, Christopher M. Kribs, Hristo V. Kojouharov*
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Understanding the impact of social contact patterns in epidemiological models

Evans Kiptoo Korir*, Zsolt Vizi
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Mathematical aspects of organization and disorganization in biology

Mirosław Lachowicz*
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Mixed positive and negative feedback loops drive diverse single-cell gene expression dynamics

Torkel E. Loman*, Christian P. Schwall, Teresa Saez, Yujia Liu, James C. W. Locke
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Mathematical modeling of biofouling formation on a membrane filtration system

Vincenzo Luongo*
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Mathematical and numerical methods for understanding immune cell motion during wound healing

Giulia Lupi*, Karol Mikula, Seol Ah Park, Martin Ambroz, Resul Ozbilgic, Mai Nguyen Chi, Georges Lutfalla
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From guesswork to groundwork: A tool to quantify disease upscaling decisions

Afonso Dimas Martins*, Frits Vlaanderen, Lapo Mughini Gras
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Modelling the influence of bacteriophage activity and horizontal gene transfer on the spread of bacterial resistance

Julien Vincent, Alberto Tenore, Maria Rosaria Mattei*, Luigi Frunzo
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Modeling dengue transmission with viral load and antibody levels

Paulo Amorim, M. Soledad Aronna, Débora O. Medeiros*
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A nonconservative kinetic model for the medical treatment of autoimmune response

Marco Menale*
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Oscillations and the cycle structure of reaction networks

Maya Mincheva*, Polly Yu
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Controlling populations of neural oscillators

Jeff Moehlis*
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A nonconservative kinetic framework with logistic growth for modeling a multi-species ecological system

Carmelo Filippo Munafò*, Marco Menale, Francesco Oliveri
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Analysis of the effects of rainfall variability on natural forage resources and the corresponding livestock production: Climate variability and livestock dynamics in Botswana

Thabo S. Nketsang*, Semu Mitiku Kassa, Gizaw Mengistu Tsidu, Moatlhodi Kgosimore
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Mathematical model of measles epidemiology with control strategies

Olumuyiwa James Peter*, Festus Abiodun Oguntolu
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Mathematical modelling of siderophores-mediated iron acquisition and cross-feeding in bacterial communities

Tosin Samuel Osikoya*, Christina Kuttler
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A multi-scale PBPK model for predicting mRNA-encoded therapeutic trafficking in mice

Elisa Pettinà*, Chiara Rosati, Stefano Giampiccolo, Luca Marchetti
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Positive feedback from growth burden in stochastic protein expression

Jakub Poljovka*, Iryna Zabaikina, Pavol Bokes, Abhyudai Singh
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Exploring the stability of a generalised Lotka-Volterra ecological model

Richard Pretorius*, Andriamihaja Ramanantoanina, Jacek Banasiak
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Mathematical modelling of human-domestic animals AMR spread: Exploring the use of colistin in livestock farming in rural areas

Jhoana P. Romero-Leiton*, Yuliana Rodriguez, Carlos Bastidas-Caldes
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Evolution of the maturation period in insect populations

Gergely Röst*
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Modeling phototrophic biofilm growth: The role of phototaxis in microbial ecology

Fabiana Russo*, Alberto Tenore, Luigi Frunzo, Maria Rosaria Mattei
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Stability and bifurcation analysis in mathematical models for oscillating pregnane X receptor levels

Bechara Saade*, Jurjen Duintjer Tebbens, Veronika Bernhauerová, Elfriede Friedmann
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A general kinetic model for the spread of infectious diseases in continuously structured compartments

Emanuele Bernardi, Tommaso Lorenzi, Mattia Sensi*, Andrea Tosin
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Numerical methods for the controlled degenerate chemotaxis model in a weak formulation

Sarah Serhal*, Georges Chamoun, Mazen Saad, Toni Sayah
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A mathematical model of methotrexate's effect on adalimumab immunogenicity in axial spondyloarthritis

Peter Rashkov, Sara Sottile*, Denis Mulleman
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On the practical stability of h-manifolds for impulsive fractional-order gene regulatory networks

Gani Stamov, Ivanka Stamova*
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Beyond the biting: a comparative study of dengue modeling approaches

Vanessa Steindorf*, Nico Stollenwerk, Bob W. Kooi, Maíra Aguiar
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Oligooscillation in a closed system without autocatalysis

Rebeka Szabó*, Gábor Lente
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A mathematical model of plasmid spread in microbial communities through horizontal gene transfer mechanisms

Julien Vincent, Alberto Tenore*, Maria Rosaria Mattei, Luigi Frunzo
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Asymptotic analysis for a class of heat diffusion problems in composites with non-standard imperfect contact conditions

Micol Amar, Daniele Andreucci, Claudia Timofte*
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Spatial patterning of bacterial colonization on leaf surfaces

Romina Travaglini*, Marzia Bisi, Davide Cusseddu, Ana Jacinta Soares
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QSAR modeling of arylsulfonylhydrazones as potential anti-breast cancer agents

Boris Vasilev*, Mariyana Atanasova
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Modelling spike frequency adaptation through higher-order fractional leaky integrate and fire model

Yash Vats*, Mani Mehra, Dietmar Oelz
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Statistical approach for quantifying the evolution of tumor heterogeneity in chronic lymphocytic leukemia (CLL)

Vidhi Vidhi*, Ulysse Herbach, Coralie Fritsch, Nicolas Champagnat
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Migration in branching processes: An overview with open problems

Tsvetomira A. Zlatkova*, Vessela K. Stoimenova
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Application of mathematical biology in agriculture: The case of the Soybean Aphid

Aniket Banerjee*
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Dynamics and optimal control of an eco-epidemiological model

Mahmoud Moustafa*
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Effect of fractional order Klein-Gordon time-nonlocally on bioheat transfer in skin tissue exposed heat radiation

Anand Kumar Yadav*, Vikas Arya
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Figures of Cramér-von Mises statistic for continuous distributions

Carmen Elena Stoenoiu*
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Fractional modeling and uncertainty quantification of hepatitis B dynamics using a homotopy approach

Ajay Kumar*, Ramakanta Meher
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Impact of age-structure dependent control during the first two years of COVID-19 pandemic in the Basque country

Akhil Kumar Srivastav*, Nico Stollenwerk, Maíra Aguiar
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Impact of chemo-immunotherapy on tumour-immune interactions: a non-autonomous model of tumor necrosis factor and T cell dynamics

Arjun Kumar*, Masoom Bhargava, Uma S. Dubey, Balram Dubey
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Impact of vaccination on tuberculosis control: a mathematical modeling approach

Festus Abiodun Oguntolu*, Olumuyiwa James Peter
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Influences of rainfall and temperature trends on the transmission and control of visceral leishmaniasis (VL)

Temesgen Debas Awoke*, Semu Mitiku Kassa, Gizaw Mengistu Tsidu, Kgomotso Susan Morupisi
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Modeling infectious disease dynamics with network-based approaches for enhanced epidemic preparedness

Oladimeji Samuel Sowole*, Geminpeter A. Lyakurwa, Yae Ulrich Gaba, Franck Kalala Mutombo
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Modeling the dynamics of leptospirosis in India

Antima, Sandip Banerjee*
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Network dynamical systems approach to decipher fundamental principles in cell fate transitions

Mubasher Rashid Rather*
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Numerical analysis of epidemic model using artificial neural networks

Amir Khan*
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