BIOMATH 2023

Conference abstracts for BIOMATH 2023. Total of 86 entries.

The forum is organised with the financial support of the Fund for Scientific Research (Contract KP-06-MNF-33/16.12.2022). The Fund for Scientific Research is not responsible for the content of the reports presented at the scientific forum, nor for the content of advertising materials and other materials for the forum.

Published: 2022-11-28

Roumen Tsanev Lecture

Novel acetylcholinesterase inhibitors developed by structure-based drug design in DDBL@MUS

Irini Doytchinova*
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Keynote/Invited Presentations

Mechanisms of cancer invasion and progression: insights from cellular automaton models

Andreas Deutsch*
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Exploring the spatial tissue environment: non-local modelling, applications, numerical challenges

Alf Gerisch*
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Controlled branching processes as models for logistic population growth

Miguel González*, Carmen Minuesa, Inés del Puerto
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Multitype controlled branching process as a model for progenitor cell populations

Miguel González, Carmen Minuesa, Inés del Puerto*, Anand N. Vidyashankar
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Mathematics of malaria transmission dynamics: the renewed quest for eradication

Abba B. Gumel*
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A stochastic model to mathematically describe the dynamics of long-lived raptor species

Manuel Molina*, Casimiro Corbacho, Manuel Mota
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Mathematical challenges in triggered drug delivery: getting the right dose to the right place at the right time

Ami Radunskaya*
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Modeling biological systems using dynamical survival models. Lessons from the recent pandemic.

Grzegorz A. Rempala*
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Modelling cellular processes: from single cells to collective behaviour

Somdatta Sinha*
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Modeling phage-bacteria interactions and phage therapy as an alternative to bacterial multidrug resistance

Berge Tsanou*
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Conference Contributions

Analysis and an NSFD method of a model of bacterial competition in the presence of a plasmid

Fawaz K. Alalhareth*, Hristo V. Kojouharov
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Higher-order modified nonstandard finite difference methods for autonomous dynamical systems

Fawaz K. Alalhareth, Madhu Gupta, Hristo V. Kojouharov*, Souvik Roy
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On the analysis of hemorheological data with mathematical models

Nadia Antonova*
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Evaluation of the effectiveness of health countermeasures against infectious disease arrival times

Yusuke Asai*
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Dynamical analysis combined with parameters identification for a model of infection in honeybee colonies with social immunity

Atanas Atanasov, Slavi Georgiev, Lubin Vulkov*
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In silico screening of natural compounds and discovery of novel acetylcholinesterase inhibitors

Mariyana Atanasova*
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Predicting hereditary BRCA1/2 mutations using publicly available data

Ekaterina Auer*, Lorenz Gillner, Wolfram Luther
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Mathematical modeling of trace-metals precipitation in biofilms

Zirhumanana Balike*, Maria Rosaria Mattei, Vincenzo Luongo, Luigi Frunzo, Véronique Deluchat Anthony
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Impact of demography on the dynamics of malaria

Jacek Banasiak*, Stephane Yanick Tchoumi, Rachid Ouifki, Woldegebriel Assefa Woldegerima
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Mathematical modelling for CTCE-9908 (a CXCR4 inhibitor) on B16 F10 melanoma cell proliferation

Charlise Basson*, June C. Serem, Priyesh Bipath, Roumen Anguelov, Avulundiah Edwin Phiri, Gandhi Manjunath, Yvette N. Hlophe
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Analysis of a basic mathematical model of CAR-T cell therapy for glioblastoma

Marek Bodnar, Urszula Foryś, Monika J. Piotrowska*, Mariusz Bodzioch, Jose A. Romero-Rosales, Juan Belmonte-Beitia
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Mathematical model of CAR-T therapy taking into account cells targeting off-tumour antigens

Marek Bodnar*, Urszula Foryś, Monika J. Piotrowska, Mariusz Bodzioch, Jose A. Romero-Rosale, Juan Belmonte-Beitia
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Periodic treatment in a mathematical model of CAR-T cell therapy for glioblastoma

Marek Bodnar, Urszula Foryś*, Monika J. Piotrowska, Mariusz Bodzioch, Jose A. Romero-Rosales, Juan Belmonte-Beitia
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On the construction of amiloid growth models

Milen Borisov*, Ivan Ivanov, Svetoslav Markov
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The SEI epidemiological model generates natural classes of biological functions: analysis using reaction netwok theory

Milen Borisov, Ognyan Kounchev, Svetoslav Markov*
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Assessing potential insights of an imperfect testing strategy: parameter estimation and practical identifiability using early COVID-19 data in India

Sarita Bugalia*, Jai Prakash Tripathi
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Asymptotic analysis for diffusion problems in thin periodic media

Renata Bunoiu, Claudia Timofte*
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Modeling the introduction of sterilizing treatment for tuberculosis in low- and middle-income countries

Daiver Cardona-Salgado*, Edwin Barrios-Rivera, Carmen A. Ramirez-Bernate, Olga Vasilieva
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Optimal control approach for establishing Wolbachia in wild population of Aedes aegypti mosquitoes

Daiver Cardona-Salgado*, Lilian Sofia Sepulveda-Salcedo, Olga Vasilieva, Jose Luis Orozco-Gonzales
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Pattern formation in the Holling-Tanner predator-prey model with prey-taxis

Michael Chapwanya*
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The impact of C-terminal amidation on antimicrobial peptide behavior: insights from molecular dynamics simulations approach

Amit Chaudhary*, Anup Prasad, Lisandra L. Martin, Ajay Singh Panwar
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Statistical model for identification of the relationship between SARS-CoV-2 prevalence and wastewater concentration with vaccination and delta variant mutation

Boseung Choi*, Grzegorz A. Rempala
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PreDQ - a software tool for peptide binding prediction to HLA-DQ2 and/or HLA-DQ8

Ivan Dimitrov*, Mariyana Atanasova, Irini Doytchinova
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In silico immunogenicity prediction of viral proteins

Nikolet Doneva*, Ivan Dimitrov
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Response surface designs and R package based modelling for predictive capabilities, sensitivity and validation of model for improving the bacterial growth, laccase production, and textile dye decolorization alongside a detoxification study

Pravin Dudhagara*, Sunil Bhavsar
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About sterile females contamination and residual fertility in a mosquito control program using the Sterile Insect Technique. Impact on Dengue control.

Yves Dumont, Ivric Valaire Yatat-Djeumen*
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About sterile insect control strategies in a two patches system

Yves Dumont*, Michel Duprez, Yannick Privat
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Construction of a new infectious disease model using the time delay

Eunjin Eom*, Siwon Ryu, Boseung Choi
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A two-stage SEIRS reinfection model with multiple endemic equilibria

Marcel Fang*, Pierre-Alexandre Bliman
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Upscaling a mixed-culture biofilm model in homogeneous porous media via multiscale asymptotics approach

Ahmed Fathi*, Maria Rosaria Mattei, Fernando G. Fermoso, Luigi Frunzo
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Distributional solutions of nonlinear diffusion equations with a moving Dirac source term

Marek Fila, Petra Macková*, Jin Takahashi, Eiji Yanagida
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How much precision is not enough in the computer molecular simulations?

Jordan Genoff*
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Optimal coefficient restoration for COVID-19 epidemic modelling

Slavi Georgiev*, Lubin Vulkov
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Genome variation analysis and strategic clustering to sub-lineage of double mutant strain B.1.617 of SARS-CoV-2

Anjana Ghelani*, Vishal Mevada, Rajesh Patel
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Spatial cumulant models enable spatially informed treatment strategies in theoretical cancer systems

Sara Hamis*
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Ultrasound experimental model for knee joint intra-articular movements

Ivan Mirchev Ivanov*, Sergey Nikolov Ranchev
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Identification and analysis of cell-specific expressed genetic variants from scRNA-seq data

Allen Kim, Kai Saito, Zhe Yu, Hovhannes Arestakesyan, Evgenia Unianova, Nathan Edwards, Anelia Horvath*
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A stochastic model of seasonal savanna

Paweł Klimasara, Marta Tyran-Kamińska*
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Adaptive strategies destabilise the rock-paper-scissors game but increase the eco-evolutionary performance

Mmatlou S. Kubyana*, Pietro Landi, Cang Hui
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Self-organization or disorder phenomena in biology

Mirosław Lachowicz*
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The hybrid Gompertz distribution - derivation, characterization and estimation (a reaction network treatment)

Meglena Lazarova, Svetoslav Markov, Andrey Vassilev*
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Modeling the control of breathing using a Boolean framework

Maria C. A. Leite*, Yunjiao Wang, Alona Ben-Tal
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On reliable numerical methods for some real-life differential equation models with singularities

Jean M.-S. Lubuma*
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Identifying parameter values for oscillations in reaction networks

Maya Mincheva*, Carsten Conradi
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An obesity and COVID-19 co-infection model

Keamogecoe Modise*
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Mathematical modelling of the relationship between high blood pressure and diabetes: a multifactorial aprroach

Gosekwang Marcia Moremedi*, Adetayo Samuel Eegunjobi
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A qualitative analysis of dog-mediated human rabies dynamics in Malawi: the role of multiple interventions in disease control

Elias Mwakilama*, Milliward Maliyoni
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State constraints optimal control problems applied to ebola epidemic model

Faïçal Ndaïrou*
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Analytical and numerical study of a diffusive predator-prey model incorporating an Allee effect

Elena V. Nikolova*
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Age-structured models of epidemiological dynamics

Juan Carlos Castillo Paz*, Jorge Xicotencatl Velasco Hernandez
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A general model of immune status

Katarzyna Pichór*, Ryszard Rudnicki
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Mathematical modelling for CTCE-9908 (a CXCR4 inhibitor) on B16 F10 melanoma cell proliferation (Part II)

Avulundiah Edwin Phiri*, Roumen Anguelov, Gandhi Manjunath, Yvette N. Hlophe, June C. Serem, Priyesh Bipath, Charlise Basson
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On an integrable version of the generalized totally asymmetric simple exclusion process on open chains

Alexander M. Povolotsky, Nina C. Pesheva, Nadezhda Zh. Bunzarova*
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On the derivation of discrete time mathematics models for mutualist populations

Andriamihaja Ramanantoanina*
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Time-scale separation in models for dengue fever

Peter Rashkov*
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Some aspects of mathematical modelling of cell cycle

Ryszard Rudnicki*, Katarzyna Pichór
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The impact of molecular docking programs and virtual screening in modern drug design

Fatima Sapundzhi*, Metodi Popstoilov, Tatyana Dzimbova
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Demographic and epidemiological characteristics of animal bites in the North West Health Region, Algeria

Schehrazad Selmane*
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Fat-tail test of regulatory DNA sequence

Jian-Jun Shu*
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Analysis of the transmission dynamics of pneumonia disease in a developing country: the effect of environment on pneumonia transmission, significance of hospital and community based care

Morelyn Sigauke*, John B.H. Njagarah, Semu Kassa
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Hybrid systems modeling of ecological population dynamics

Abhyudai Singh*, Brooks Emerick
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Assessment of human proteins for potential tumour immunogenicity by in silico models

Stanislav Sotirov*, Ivan Dimitrov
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On the qualitative analysis of fractional-order impulsive gene regulatory networks

Gani Stamov, Trayan Stamov, Ivanka Stamova*
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A mathematical model for compression of poroviscoelastic biological material like articular cartilage

Stoyan Stoytchev, Svetoslav Nikolov*, Vassil Vassilev
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Estimation of the parameters of the mathematical model for articular cartilage compression

Stoyan Stoytchev*
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Influence of the co-dynamics Ebola-COVID-19 in the population

Arsène Jaures Ouemba Tassé*, Jean Lubuma, Berge Tsanou
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Impact of self-protection measures to reduce antibiotic resistant gonorrhoea infection

Yibeltal Adane Terefe*, Semu Mitiku Kassa, Manalebish Debalike Asfaw, Christiaan Venter
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Integrating mixed reality technologies in genomic data visualization and analysis for bioinformatics research

Tereza Trencheva, Ivan Trenchev*
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Modeling the COVID-19 incorporating variants and vaccines

María Vela-Pérez*, Alicja Barbara Kubik, Miriam Ruiz Ferrandez, Benjamin Ivorra, Angel Manuel Ramos
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Weakly reversible realizations of Biochemical Systems Theory (BST) models

Exequiel Jun V. Villejo*, Dylan Antonio S. J. Talabis
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Modelling horizontal gene transfer of plasmid-mediated resistance in biofilms

Julien Vincent*, Alberto Tenore, Maria Rosaria Mattei, Luigi Frunzo
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Pursuit-evasion dynamics in predator-prey models

Dariusz Wrzosek*
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Nonhomogeneous multitype Markov branching stochastic processes as models of cell population dynamics

Nikolay Yanev*, Maroussia Slavchova-Bojkova, Kosto Mitov, Ollivier Hyrien
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On an optimal control problem arising from the tumor treatment

Hong-Ming Yin*
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Quantifying noise modulation from coupling of stochastic expression to cellular growth: an analytical approach

Iryna Zabaikina*, Zhanhao Zhang, César Nieto, Pavol Bokes, Abhyudai Singh
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BIOMATH 2023

Roumen Tsanev Lecture

Keynote/Invited Presentations

Conference Contributions

Cover

Journals